An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus
Identifieur interne : 000C08 ( Main/Exploration ); précédent : 000C07; suivant : 000C09An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus
Auteurs : Juxun Wu [République populaire de Chine] ; Zhilong Xu [République populaire de Chine] ; Yajian Zhang [République populaire de Chine] ; Lijun Chai [République populaire de Chine] ; Hualin Yi [République populaire de Chine] ; Xiuxin Deng [République populaire de Chine]Source :
- Journal of Experimental Botany [ 0022-0957 ] ; 2014.
English descriptors
- KwdEn :
- Abscisic Acid (analysis), Abscisic Acid (metabolism), Carboxylic Acids (metabolism), Cell Wall (metabolism), Chlorophyll (metabolism), Citrus sinensis (genetics), Citrus sinensis (growth & development), Citrus sinensis (metabolism), Ethylenes (analysis), Ethylenes (metabolism), Fruit (genetics), Fruit (growth & development), Fruit (metabolism), Gene Expression Profiling, Gene Expression Regulation, Plant, Gene Regulatory Networks, Models, Biological, Phenotype, Plant Growth Regulators (analysis), Plant Growth Regulators (metabolism), Plant Proteins (metabolism), Proteome, Sequence Analysis, RNA, Species Specificity, Sucrose, Transcriptome.
- MESH :
- chemical , analysis : Abscisic Acid, Ethylenes, Plant Growth Regulators.
- chemical , metabolism : Abscisic Acid, Carboxylic Acids, Chlorophyll, Ethylenes, Plant Growth Regulators, Plant Proteins.
- genetics : Citrus sinensis, Fruit.
- growth & development : Citrus sinensis, Fruit.
- metabolism : Cell Wall, Citrus sinensis, Fruit.
- Gene Expression Profiling, Gene Expression Regulation, Plant, Gene Regulatory Networks, Models, Biological, Phenotype, Proteome, Sequence Analysis, RNA, Species Specificity, Sucrose, Transcriptome.
Abstract
ABA, ethylene, sucrose, and their related genes and pathways are involved in fruit ripening of citrus, and ABA may play a central role during the ripening process.
Url:
DOI: 10.1093/jxb/eru044
PubMed: 24600016
PubMed Central: 3967095
Affiliations:
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China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Xu, Zhilong" sort="Xu, Zhilong" uniqKey="Xu Z" first="Zhilong" last="Xu">Zhilong Xu</name><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zhang, Yajian" sort="Zhang, Yajian" uniqKey="Zhang Y" first="Yajian" last="Zhang">Yajian Zhang</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Chai, Lijun" sort="Chai, Lijun" uniqKey="Chai L" first="Lijun" last="Chai">Lijun Chai</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de 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wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">24600016</idno><idno type="pmc">3967095</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3967095</idno><idno type="RBID">PMC:3967095</idno><idno type="doi">10.1093/jxb/eru044</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">001037</idno><idno type="wicri:Area/Pmc/Curation">001036</idno><idno type="wicri:Area/Pmc/Checkpoint">000917</idno><idno type="wicri:source">PubMed</idno><idno type="wicri:Area/PubMed/Corpus">000354</idno><idno type="wicri:Area/PubMed/Curation">000354</idno><idno type="wicri:Area/PubMed/Checkpoint">000354</idno><idno type="wicri:Area/Ncbi/Merge">001616</idno><idno 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xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Xu, Zhilong" sort="Xu, Zhilong" uniqKey="Xu Z" first="Zhilong" last="Xu">Zhilong Xu</name><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zhang, Yajian" sort="Zhang, Yajian" uniqKey="Zhang Y" first="Yajian" last="Zhang">Yajian Zhang</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Chai, Lijun" sort="Chai, Lijun" uniqKey="Chai L" first="Lijun" last="Chai">Lijun Chai</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Yi, Hualin" sort="Yi, Hualin" uniqKey="Yi H" first="Hualin" last="Yi">Hualin Yi</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University</institution>,<addr-line>Wuhan 430070</addr-line>,<country>PR China</country></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Journal of Experimental Botany</title><idno type="ISSN">0022-0957</idno><idno type="eISSN">1460-2431</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Abscisic Acid (analysis)</term><term>Abscisic Acid (metabolism)</term><term>Carboxylic Acids (metabolism)</term><term>Cell Wall (metabolism)</term><term>Chlorophyll (metabolism)</term><term>Citrus sinensis (genetics)</term><term>Citrus sinensis (growth & development)</term><term>Citrus sinensis (metabolism)</term><term>Ethylenes (analysis)</term><term>Ethylenes (metabolism)</term><term>Fruit (genetics)</term><term>Fruit (growth & development)</term><term>Fruit (metabolism)</term><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Plant</term><term>Gene Regulatory Networks</term><term>Models, Biological</term><term>Phenotype</term><term>Plant Growth Regulators (analysis)</term><term>Plant Growth Regulators (metabolism)</term><term>Plant Proteins (metabolism)</term><term>Proteome</term><term>Sequence Analysis, RNA</term><term>Species Specificity</term><term>Sucrose</term><term>Transcriptome</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Abscisic Acid</term><term>Ethylenes</term><term>Plant Growth Regulators</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Abscisic Acid</term><term>Carboxylic Acids</term><term>Chlorophyll</term><term>Ethylenes</term><term>Plant Growth Regulators</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Citrus sinensis</term><term>Fruit</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Citrus sinensis</term><term>Fruit</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Wall</term><term>Citrus sinensis</term><term>Fruit</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Plant</term><term>Gene Regulatory Networks</term><term>Models, Biological</term><term>Phenotype</term><term>Proteome</term><term>Sequence Analysis, RNA</term><term>Species Specificity</term><term>Sucrose</term><term>Transcriptome</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Summary:</title><p>ABA, ethylene, sucrose, and their related genes and pathways are involved in fruit ripening of citrus, and ABA may play a central role during the ripening process.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Alexander, L" uniqKey="Alexander L">L Alexander</name></author><author><name sortKey="Grierson, D" uniqKey="Grierson D">D Grierson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alonso, Jm" uniqKey="Alonso J">JM Alonso</name></author><author><name sortKey="Hirayama, T" uniqKey="Hirayama T">T Hirayama</name></author><author><name sortKey="Roman, G" uniqKey="Roman G">G Roman</name></author><author><name sortKey="Nourizadeh, S" uniqKey="Nourizadeh S">S Nourizadeh</name></author><author><name sortKey="Ecker, Jr" uniqKey="Ecker J">JR Ecker</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Atmodjo, Ma" uniqKey="Atmodjo M">MA Atmodjo</name></author><author><name sortKey="Sakuragi, Y" uniqKey="Sakuragi Y">Y Sakuragi</name></author><author><name sortKey="Zhu, X" uniqKey="Zhu X">X Zhu</name></author><author><name sortKey="Burrell, Aj" uniqKey="Burrell A">AJ Burrell</name></author><author><name sortKey="Mohanty, Ss" uniqKey="Mohanty S">SS Mohanty</name></author><author><name sortKey="Atwood, Ja" uniqKey="Atwood J">JA Atwood</name></author><author><name sortKey="Orlando, R" uniqKey="Orlando R">R Orlando</name></author><author><name sortKey="Scheller, Hv" uniqKey="Scheller H">HV Scheller</name></author><author><name sortKey="Mohnen, D" uniqKey="Mohnen D">D Mohnen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bain, J" uniqKey="Bain J">J Bain</name></author></analytic></biblStruct><biblStruct><analytic><author><name 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M">MM Zhu</name></author><author><name sortKey="Dai, Sj" uniqKey="Dai S">SJ Dai</name></author><author><name sortKey="Mcclung, S" uniqKey="Mcclung S">S McClung</name></author><author><name sortKey="Yan, Xf" uniqKey="Yan X">XF Yan</name></author><author><name sortKey="Chen, Sx" uniqKey="Chen S">SX Chen</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Wu, Juxun" sort="Wu, Juxun" uniqKey="Wu J" first="Juxun" last="Wu">Juxun Wu</name></noRegion><name sortKey="Chai, Lijun" sort="Chai, Lijun" uniqKey="Chai L" first="Lijun" last="Chai">Lijun Chai</name><name sortKey="Chai, Lijun" sort="Chai, Lijun" uniqKey="Chai L" first="Lijun" last="Chai">Lijun Chai</name><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><name sortKey="Wu, Juxun" sort="Wu, Juxun" uniqKey="Wu J" first="Juxun" last="Wu">Juxun Wu</name><name sortKey="Xu, Zhilong" sort="Xu, Zhilong" uniqKey="Xu Z" first="Zhilong" last="Xu">Zhilong Xu</name><name sortKey="Yi, Hualin" sort="Yi, Hualin" uniqKey="Yi H" first="Hualin" last="Yi">Hualin Yi</name><name sortKey="Yi, Hualin" sort="Yi, Hualin" uniqKey="Yi H" first="Hualin" last="Yi">Hualin Yi</name><name sortKey="Zhang, Yajian" sort="Zhang, Yajian" uniqKey="Zhang Y" first="Yajian" last="Zhang">Yajian Zhang</name><name sortKey="Zhang, Yajian" sort="Zhang, Yajian" uniqKey="Zhang Y" first="Yajian" last="Zhang">Yajian Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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